EnhancerDB
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  3. rs548294542[chr1:234874135]
Enhancers that have rs548294542[chr1:234874135]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234827105 234875936 enh12795
Bone Marrow (K562) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs548294542[chr1:234874135]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234872806 234876373 ZNF274 GTRD no Bone Marrow (K562) 21397128
chr1 234873078 234878919 ZNF274 GTRD no Bone Marrow (K562) 21397129
chr1 234873078 234878919 ZNF274 GTRD no Bone Marrow (K562) 21397130
chr1 234873104 234878997 ZNF274 GTRD no Bone Marrow (K562) 21397131
chr1 234873104 234878997 ZNF274 GTRD no Bone Marrow (K562) 21397132
chr1 234873111 234880291 ZNF274 GTRD no Bone Marrow (K562) 21397133
chr1 234873111 234880291 ZNF274 GTRD no Bone Marrow (K562) 21397134
chr1 234873116 234878842 ZNF274 GTRD no Bone Marrow (K562) 21397135
chr1 234873116 234878842 ZNF274 GTRD no Bone Marrow (K562) 21397136
chr1 234873350 234877532 ZNF274 GTRD no Liver (HepG2) 21397137
chr1 234873350 234877532 ZNF274 GTRD no Liver (HepG2) 21397138
chr1 234873545 234875201 ZNF274 GTRD no Bone Marrow (K562) 21397139
chr1 234873657 234875541 ZNF274 GTRD no Bone Marrow (K562) 21397140
chr1 234873958 234875159 ZNF143 GTRD no Epithelial (MCF-7) 21397142
chr1 234873959 234877343 ZNF143 GTRD no Epithelial (MCF-7) 21397143
chr1 234873959 234877343 ZNF143 GTRD no Epithelial (MCF-7) 21397144
chr1 234873987 234876551 ZNF143 GTRD no Epithelial (MCF-7) 21397145
chr1 234874016 234875186 ZNF143 GTRD no Epithelial (MCF-7) 21397146
chr1 234874019 234874981 ZNF143 GTRD no Epithelial (MCF-7) 21397147
chr1 234874044 234875102 ZNF274 GTRD no Bone Marrow (K562) 21397148
chr1 234874065 234877588 ZNF274 GTRD no Liver (HepG2) 21397149
chr1 234874065 234877588 ZNF274 GTRD no Liver (HepG2) 21397150
chr1 234874086 234878225 ZNF274 GTRD no Liver (HepG2) 21397151
chr1 234874086 234878225 ZNF274 GTRD no Liver (HepG2) 21397152
chr1 234874090 234875138 ZNF274 GTRD no Liver (HepG2) 21397153
chr1 234874098 234877310 ZNF274 GTRD no Liver (HepG2) 21397154
chr1 234874098 234877310 ZNF274 GTRD no Liver (HepG2) 21397155
chr1 234874104 234875188 ZNF143 GTRD no Epithelial (MCF-7) 21397156
chr1 234874105 234877153 ZNF274 GTRD no Liver (HepG2) 21397157
chr1 234874105 234877153 ZNF274 GTRD no Liver (HepG2) 21397158
chr1 234874116 234875240 ZNF274 GTRD no Bone Marrow (K562) 21397159
chr1 234874117 234875234 ZNF274 GTRD no Liver (HepG2) 21397160
chr1 234874118 234877564 ZNF274 GTRD no Bone Marrow (K562) 21397161
chr1 234874118 234877564 ZNF274 GTRD no Bone Marrow (K562) 21397162
chr1 234874120 234875214 ZNF143 GTRD no Epithelial (MCF-7) 21397163
chr1 234874125 234875124 ZNF274 GTRD no Bone Marrow (K562) 21397164
chr1 234874125 234877171 ZNF274 GTRD no Liver (HepG2) 21397165
chr1 234874125 234877171 ZNF274 GTRD no Liver (HepG2) 21397166
chr1 234874132 234875307 ZNF274 GTRD no Liver (HepG2) 21397167
chr1 234874135 234874142 NKX3-1 JASPAR yes 36309500
Genes associated with rs548294542[chr1:234874135], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More