EnhancerDB
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  3. rs548354689[chr17:42540353]
Enhancers that have rs548354689[chr17:42540353]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42536285 42540435 enh92729
Liver (HepG2)
Transcript factors that have rs548354689[chr17:42540353]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42540348 42540363 FOXP1 JASPAR yes 54400936
chr17 42540348 42540363 MEF2C JASPAR yes 54400937
chr17 42540349 42540364 FOXA1 JASPAR yes 54400938
chr17 42540349 42540364 MEF2A JASPAR yes 54400939
chr17 42540350 42540361 FOXB1 JASPAR yes 54400940
chr17 42540350 42540361 FOXC1 JASPAR yes 54400941
chr17 42540350 42540362 FOXC2 JASPAR yes 54400942
chr17 42540350 42540362 MEF2A JASPAR yes 54400943
chr17 42540350 42540362 MEF2B JASPAR yes 54400944
chr17 42540350 42540362 MEF2D JASPAR yes 54400945
chr17 42540351 42540361 MEF2A JASPAR yes 54400946
chr17 42540351 42540363 FOXI1 JASPAR yes 54400947
chr17 42540352 42540356 TEAD2 TRANSFAC yes 54400948
chr17 42540352 42540357 TBP TRANSFAC yes 54400949
chr17 42540352 42540358 TMF TRANSFAC yes 54400950
chr17 42540352 42540366 FOXF2 JASPAR yes 54400951
chr17 42540352 42540366 ONECUT3 JASPAR yes 54400952
chr17 42540352 42540367 FOXP1 JASPAR yes 54400953
chr17 42540352 42540367 HNF1A JASPAR yes 54400954
chr17 42540353 42540367 POU4F1 JASPAR yes 54400955
chr17 42540353 42540368 FOXA1 JASPAR yes 54400956
chr17 42540353 42540369 POU4F2 JASPAR yes 54400957
chr17 42540353 42540369 POU4F3 JASPAR yes 54400958
Genes associated with rs548354689[chr17:42540353], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More