EnhancerDB
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  3. rs548521667[chr12:59062535]
Enhancers that have rs548521667[chr12:59062535]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 59058965 59069535 enh29605
Astrocyte Brain (SK-N-MC)
Transcript factors that have rs548521667[chr12:59062535]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 59062515 59062536 IRF1 JASPAR yes 121190960
chr12 59062521 59062542 IRF1 JASPAR yes 121190963
chr12 59062522 59062543 IRF1 JASPAR yes 121190964
chr12 59062523 59062538 STAT2 JASPAR yes 121190965
chr12 59062523 59062544 IRF1 JASPAR yes 121190966
chr12 59062524 59062545 IRF1 JASPAR yes 121190967
chr12 59062525 59062546 IRF1 JASPAR yes 121190968
chr12 59062526 59062541 FOXP1 JASPAR yes 121190969
chr12 59062526 59062547 IRF1 JASPAR yes 121190970
chr12 59062527 59062542 FOXP1 JASPAR yes 121190971
chr12 59062527 59062548 IRF1 JASPAR yes 121190972
chr12 59062528 59062543 FOXP1 JASPAR yes 121190973
chr12 59062528 59062549 IRF1 JASPAR yes 121190974
chr12 59062529 59062544 FOXP1 JASPAR yes 121190975
chr12 59062529 59062550 IRF1 JASPAR yes 121190976
chr12 59062530 59062545 FOXP1 JASPAR yes 121190977
chr12 59062531 59062546 FOXP1 JASPAR yes 121190978
chr12 59062531 59062552 IRF1 JASPAR yes 121190979
chr12 59062532 59062547 FOXP1 JASPAR yes 121190980
chr12 59062533 59062548 FOXP1 JASPAR yes 121190981
chr12 59062534 59062549 FOXP1 JASPAR yes 121190982
chr12 59062535 59062550 FOXP1 JASPAR yes 121190983
Genes associated with rs548521667[chr12:59062535], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More