EnhancerDB
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Enhancers that have rs548610253[chr17:42561525]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42561305 42570175 enh4423
Thyroid Liver (HepG2) Blood (Karpas-422)
Transcript factors that have rs548610253[chr17:42561525]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42561510 42561526 POU4F2 JASPAR yes 54401083
chr17 42561510 42561526 POU4F3 JASPAR yes 54401084
chr17 42561511 42561526 FOXA1 JASPAR yes 54401086
chr17 42561512 42561526 POU4F1 JASPAR yes 54401088
chr17 42561512 42561527 FOXP1 JASPAR yes 54401089
chr17 42561512 42561527 HNF1A JASPAR yes 54401090
chr17 42561513 42561525 FOXC2 JASPAR yes 54401091
chr17 42561513 42561527 ONECUT2 JASPAR yes 54401092
chr17 42561513 42561527 ONECUT3 JASPAR yes 54401093
chr17 42561514 42561525 FOXB1 JASPAR yes 54401094
chr17 42561514 42561525 FOXC1 JASPAR yes 54401095
chr17 42561514 42561525 PROP1 JASPAR yes 54401096
chr17 42561515 42561530 FOXA1 JASPAR yes 54401098
chr17 42561516 42561528 FOXI1 JASPAR yes 54401099
chr17 42561516 42561531 FOXP1 JASPAR yes 54401100
chr17 42561517 42561529 FOXC2 JASPAR yes 54401101
chr17 42561517 42561531 ONECUT2 JASPAR yes 54401102
chr17 42561517 42561531 ONECUT3 JASPAR yes 54401103
chr17 42561518 42561529 FOXB1 JASPAR yes 54401104
chr17 42561518 42561529 FOXC1 JASPAR yes 54401105
chr17 42561523 42561527 YY1 TRANSFAC yes 54401107
Genes associated with rs548610253[chr17:42561525], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More