-
Home
- SNP
- rs549029470[chr17:8029416]
Enhancers that have rs549029470[chr17:8029416]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
8029074 |
8029494 |
vista23893 |
|
|
Transcript factors that have rs549029470[chr17:8029416]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
8028737
|
8030094
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108235943
|
|
|
chr17
|
8028737
|
8030094
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108235944
|
|
|
chr17
|
8028787
|
8029769
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108235956
|
|
|
chr17
|
8028787
|
8029769
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108235957
|
|
|
chr17
|
8028910
|
8029773
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108236001
|
|
|
chr17
|
8028910
|
8029773
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108236002
|
|
|
chr17
|
8028924
|
8029575
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108236009
|
|
|
chr17
|
8028998
|
8029658
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108236028
|
|
|
chr17
|
8028998
|
8029658
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108236029
|
|
|
chr17
|
8029047
|
8029616
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108236034
|
|
|
chr17
|
8029056
|
8029663
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108236035
|
|
|
chr17
|
8029056
|
8029663
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108236036
|
|
|
chr17
|
8029058
|
8029597
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108236037
|
|
|
chr17
|
8029063
|
8029527
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108236038
|
|
|
chr17
|
8029065
|
8029613
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108236039
|
|
|
chr17
|
8029081
|
8029575
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108236041
|
|
|
chr17
|
8029081
|
8029618
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108236042
|
|
|
chr17
|
8029084
|
8029531
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108236043
|
|
|
chr17
|
8029086
|
8029435
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108236044
|
|
|
chr17
|
8029093
|
8029529
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108236045
|
|
|
chr17
|
8029104
|
8029554
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108236046
|
|
|
chr17
|
8029109
|
8029697
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108236047
|
|
|
chr17
|
8029109
|
8029697
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108236048
|
|
|
chr17
|
8029113
|
8029673
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108236049
|
|
|
chr17
|
8029113
|
8029673
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108236050
|
|
|
chr17
|
8029122
|
8029532
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108236051
|
|
|
chr17
|
8029187
|
8029622
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108236053
|
|
|
chr17
|
8029190
|
8029614
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108236054
|
|
|
chr17
|
8029216
|
8029460
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108236055
|
|
|
chr17
|
8029221
|
8029601
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108236056
|
|
|
chr17
|
8029223
|
8029465
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108236057
|
|
|
chr17
|
8029223
|
8029520
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108236058
|
|
|
chr17
|
8029238
|
8029458
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108236059
|
|
|
chr17
|
8029289
|
8029599
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108236060
|
|
|
chr17
|
8029345
|
8029462
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108236061
|
|
|
chr17
|
8029357
|
8029701
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108236062
|
|
|
chr17
|
8029357
|
8029701
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108236063
|
|
|
chr17
|
8029360
|
8029730
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108236064
|
|
|
chr17
|
8029360
|
8029730
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108236065
|
|
|
chr17
|
8029403
|
8029879
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108236066
|
|
|
chr17
|
8029403
|
8029879
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108236067
|
|
|
chr17
|
8029408
|
8029422
|
GLIS2
|
JASPAR
|
yes
|
|
21193399
|
|
|
chr17
|
8029408
|
8029422
|
GLIS3
|
JASPAR
|
yes
|
|
21193400
|
|
|
chr17
|
8029408
|
8029422
|
ZIC1
|
JASPAR
|
yes
|
|
21193401
|
|
|
chr17
|
8029408
|
8029423
|
ZIC3
|
JASPAR
|
yes
|
|
21193402
|
|
|
chr17
|
8029408
|
8029423
|
ZIC4
|
JASPAR
|
yes
|
|
21193403
|
|
|
chr17
|
8029411
|
8029424
|
TFAP2A
|
JASPAR
|
yes
|
|
21193404
|
|
|
chr17
|
8029411
|
8029424
|
TFAP2B
|
JASPAR
|
yes
|
|
21193405
|
|
|
chr17
|
8029411
|
8029424
|
TFAP2C
|
JASPAR
|
yes
|
|
21193406
|
|
|
chr17
|
8029416
|
8029431
|
NR2C2
|
JASPAR
|
yes
|
|
21193407
|
|
Genes associated with rs549029470[chr17:8029416], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |