EnhancerDB
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  3. rs549065207[chr19:3562239]
Enhancers that have rs549065207[chr19:3562239]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3558330 3566135 enh17866
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Astrocyte Blood (OCI-LY7) Placenta Colon (HCT116) Lung (PC-9)
Transcript factors that have rs549065207[chr19:3562239]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3561855 3563776 TCF7L2 GTRD no Colon (HCT116) 21839635
chr19 3561855 3563776 TCF7L2 GTRD no Colon (HCT116) 108367835
chr19 3561885 3563548 TCF7L2 GTRD no Colon (HCT116) 21839636
chr19 3561885 3563548 TCF7L2 GTRD no Colon (HCT116) 108367836
chr19 3561898 3562744 TCF7L2 GTRD no Colon (HCT116) 21839637
chr19 3561898 3562744 TCF7L2 GTRD no Colon (HCT116) 108367837
chr19 3561917 3562833 TCF7L2 GTRD no Colon (HCT116) 21839638
chr19 3561917 3562833 TCF7L2 GTRD no Colon (HCT116) 108367838
chr19 3561981 3563212 ZNF274 GTRD no Cervix (HeLa-S3) 21839639
chr19 3561981 3563212 ZNF274 GTRD no Cervix (HeLa-S3) 108367839
chr19 3562070 3563176 ZNF274 GTRD no Cervix (HeLa-S3) 21839640
chr19 3562070 3563176 ZNF274 GTRD no Cervix (HeLa-S3) 108367840
chr19 3562104 3563228 ZBTB33 GTRD no Lung (A549) 108367841
chr19 3562105 3564485 TCF7L2 GTRD no Colon (HCT116) 21839641
chr19 3562105 3564485 TCF7L2 GTRD no Colon (HCT116) 108367842
chr19 3562107 3562629 ZBTB33 GTRD no Lung (A549) 108367843
chr19 3562110 3563206 ZBTB33 GTRD no Lung (A549) 108367844
chr19 3562111 3562789 TCF7L2 GTRD no Colon (HCT116) 21839642
chr19 3562111 3562789 TCF7L2 GTRD no Colon (HCT116) 108367845
chr19 3562111 3563184 ZNF274 GTRD no Cervix (HeLa-S3) 21839643
chr19 3562111 3563184 ZNF274 GTRD no Cervix (HeLa-S3) 108367846
chr19 3562116 3563061 ZBTB33 GTRD no Lung (A549) 108367847
chr19 3562117 3563122 ZNF274 GTRD no Cervix (HeLa-S3) 21839644
chr19 3562117 3563122 ZNF274 GTRD no Cervix (HeLa-S3) 108367848
chr19 3562149 3562630 ZBTB33 GTRD no Lung (A549) 108367849
chr19 3562159 3563187 ZNF274 GTRD no Cervix (HeLa-S3) 21839645
chr19 3562159 3563187 ZNF274 GTRD no Cervix (HeLa-S3) 108367850
chr19 3562163 3563091 ZNF274 GTRD no Bone Marrow (K562) 21839646
chr19 3562163 3563091 ZNF274 GTRD no Bone Marrow (K562) 108367851
chr19 3562185 3563159 ZNF274 GTRD no Cervix (HeLa-S3) 21839647
chr19 3562185 3563159 ZNF274 GTRD no Cervix (HeLa-S3) 108367852
chr19 3562189 3562734 ZNF274 GTRD no Bone Marrow (K562) 21839648
chr19 3562189 3562734 ZNF274 GTRD no Bone Marrow (K562) 108367853
chr19 3562192 3562673 ZNF274 GTRD no Cervix (HeLa-S3) 21839649
chr19 3562192 3562673 ZNF274 GTRD no Cervix (HeLa-S3) 108367854
chr19 3562196 3562651 ZNF274 GTRD no Cervix (HeLa-S3) 21839650
chr19 3562196 3562651 ZNF274 GTRD no Cervix (HeLa-S3) 108367855
chr19 3562208 3563207 ZBTB33 GTRD no Lung (A549) 108367856
chr19 3562209 3563193 ZNF274 GTRD no Cervix (HeLa-S3) 21839651
chr19 3562209 3563193 ZNF274 GTRD no Cervix (HeLa-S3) 108367857
chr19 3562210 3562666 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21839652
chr19 3562210 3562666 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108367858
chr19 3562213 3562627 ZNF274 GTRD no Liver (HepG2) 108367859
chr19 3562213 3563068 POLR2A UCSC Txn Factor no Conserved 108367860
chr19 3562213 3563202 ZNF274 GTRD no Cervix (HeLa-S3) 21839653
chr19 3562213 3563202 ZNF274 GTRD no Cervix (HeLa-S3) 108367861
chr19 3562219 3562722 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21839654
chr19 3562219 3562722 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108367862
chr19 3562228 3562864 ZNF274 GTRD no Cervix (HeLa-S3) 21839655
chr19 3562228 3562864 ZNF274 GTRD no Cervix (HeLa-S3) 108367863
chr19 3562228 3563081 ZNF274 GTRD no Cervix (HeLa-S3) 21839656
chr19 3562228 3563081 ZNF274 GTRD no Cervix (HeLa-S3) 108367864
chr19 3562228 3563203 ZBTB33 GTRD no Lung (A549) 108367865
chr19 3562230 3562239 ZEB1 JASPAR yes 112139754
chr19 3562230 3563219 ZBTB33 GTRD no Lung (A549) 108367866
chr19 3562231 3562239 TBX15 JASPAR yes 112139755
chr19 3562231 3562239 TBX4 JASPAR yes 112139756
chr19 3562231 3562244 SMAD2 JASPAR yes 112139757
chr19 3562231 3562635 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21839657
chr19 3562231 3562635 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108367867
Genes associated with rs549065207[chr19:3562239], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More