EnhancerDB
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  3. rs549186928[chr6:37521483]
Enhancers that have rs549186928[chr6:37521483]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 37512005 37533256 enh9092
Prostate (PC-3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Thymus
chr6 37521439 37521998 vista51821
VISTA
Transcript factors that have rs549186928[chr6:37521483]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 37521208 37524171 POLR2A UCSC Txn Factor no Conserved 108540106
chr6 37521208 37524171 POLR2A UCSC Txn Factor no Conserved 108540107
chr6 37521208 37524171 POLR2A UCSC Txn Factor no Conserved 108540108
chr6 37521278 37521724 RELA UCSC Txn Factor no Conserved 108540109
chr6 37521338 37521750 RUNX3 UCSC Txn Factor no Conserved 108540110
chr6 37521407 37521723 EBF1 UCSC Txn Factor no Conserved 108540111
chr6 37521473 37521488 STAT1 JASPAR yes 70358687
chr6 37521473 37521488 STAT1 JASPAR yes 101418629
chr6 37521475 37521486 STAT1 JASPAR yes 70358689
chr6 37521475 37521486 STAT3 JASPAR yes 70358690
chr6 37521475 37521486 STAT1 JASPAR yes 101418631
chr6 37521475 37521486 STAT3 JASPAR yes 101418632
chr6 37521483 37521491 EHF JASPAR yes 70358691
chr6 37521483 37521491 EHF JASPAR yes 101418633
Genes associated with rs549186928[chr6:37521483], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More