Enhancers that have rs549334526[chr1:20745268]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 20741505 20745655 enh104

Transcript factors that have rs549334526[chr1:20745268]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 20745256 20745272 POU4F2 JASPAR yes 27247244
chr1 20745256 20745272 POU4F3 JASPAR yes 27247245
chr1 20745258 20745272 POU4F1 JASPAR yes 27247246
chr1 20745258 20745273 HNF1A JASPAR yes 27247247
chr1 20745259 20745269 GSX1 JASPAR yes 27247248
chr1 20745259 20745269 GSX2 JASPAR yes 27247249
chr1 20745259 20745269 LHX2 JASPAR yes 27247250
chr1 20745259 20745269 LHX6 JASPAR yes 27247251
chr1 20745259 20745269 MNX1 JASPAR yes 27247252
chr1 20745259 20745269 NOTO JASPAR yes 27247253
chr1 20745259 20745269 POU6F1 JASPAR yes 27247254
chr1 20745259 20745269 RAX JASPAR yes 27247255
chr1 20745259 20745274 HNF1A JASPAR yes 27247256
chr1 20745260 20745268 ISX JASPAR yes 27247257
chr1 20745260 20745268 LMX1A JASPAR yes 27247258
chr1 20745260 20745268 LMX1B JASPAR yes 27247259
chr1 20745260 20745268 NKX6-1 JASPAR yes 27247260
chr1 20745260 20745268 NKX6-2 JASPAR yes 27247261
chr1 20745260 20745268 PRRX1 JASPAR yes 27247262
chr1 20745260 20745268 RAX2 JASPAR yes 27247263
chr1 20745260 20745268 SHOX JASPAR yes 27247264
chr1 20745260 20745268 UNCX JASPAR yes 27247265
chr1 20745260 20745268 VAX1 JASPAR yes 27247266
chr1 20745260 20745271 PHOX2A JASPAR yes 27247267
chr1 20745260 20745271 PROP1 JASPAR yes 27247268
chr1 20745260 20745274 POU4F1 JASPAR yes 27247269
chr1 20745260 20745276 POU4F2 JASPAR yes 27247270
chr1 20745260 20745276 POU4F3 JASPAR yes 27247271
chr1 20745261 20745271 PAX3 JASPAR yes 27247272
chr1 20745261 20745271 PAX7 JASPAR yes 27247273
chr1 20745261 20745272 PHOX2A JASPAR yes 27247274
chr1 20745261 20745272 PROP1 JASPAR yes 27247275
chr1 20745262 20745276 POU4F1 JASPAR yes 27247276
chr1 20745262 20745277 HNF1A JASPAR yes 27247277
chr1 20745263 20745273 GSX1 JASPAR yes 27247278
chr1 20745263 20745273 GSX2 JASPAR yes 27247279
chr1 20745263 20745273 LHX2 JASPAR yes 27247280
chr1 20745263 20745273 LHX6 JASPAR yes 27247281
chr1 20745263 20745273 MNX1 JASPAR yes 27247282
chr1 20745263 20745273 NOTO JASPAR yes 27247283
chr1 20745263 20745273 POU6F1 JASPAR yes 27247284
chr1 20745263 20745273 RAX JASPAR yes 27247285
chr1 20745264 20745272 ISX JASPAR yes 27247286
chr1 20745264 20745272 LMX1A JASPAR yes 27247287
chr1 20745264 20745272 LMX1B JASPAR yes 27247288
chr1 20745264 20745272 NKX6-1 JASPAR yes 27247289
chr1 20745264 20745272 NKX6-2 JASPAR yes 27247290
chr1 20745264 20745272 PRRX1 JASPAR yes 27247291
chr1 20745264 20745272 RAX2 JASPAR yes 27247292
chr1 20745264 20745272 SHOX JASPAR yes 27247293
chr1 20745264 20745272 UNCX JASPAR yes 27247294
chr1 20745264 20745272 VAX1 JASPAR yes 27247295
chr1 20745264 20745275 PHOX2A JASPAR yes 27247296
chr1 20745264 20745275 PROP1 JASPAR yes 27247297
chr1 20745265 20745275 PAX3 JASPAR yes 27247298
chr1 20745265 20745275 PAX7 JASPAR yes 27247299
chr1 20745265 20745276 PHOX2A JASPAR yes 27247300
chr1 20745265 20745276 PROP1 JASPAR yes 27247301
chr1 20745267 20745277 EMX1 JASPAR yes 27247302
chr1 20745267 20745277 EMX2 JASPAR yes 27247303
chr1 20745267 20745277 GSX1 JASPAR yes 27247304
chr1 20745267 20745277 LHX2 JASPAR yes 27247305
chr1 20745267 20745277 LHX6 JASPAR yes 27247306
chr1 20745267 20745277 MIXL1 JASPAR yes 27247307
chr1 20745267 20745277 MNX1 JASPAR yes 27247308
chr1 20745267 20745277 NOTO JASPAR yes 27247309
chr1 20745267 20745277 POU6F1 JASPAR yes 27247310
chr1 20745267 20745277 RAX JASPAR yes 27247311
chr1 20745268 20745276 ISX JASPAR yes 27247312
chr1 20745268 20745276 LMX1A JASPAR yes 27247313
chr1 20745268 20745276 LMX1B JASPAR yes 27247314
chr1 20745268 20745276 NKX6-1 JASPAR yes 27247315
chr1 20745268 20745276 NKX6-2 JASPAR yes 27247316
chr1 20745268 20745276 PRRX1 JASPAR yes 27247317
chr1 20745268 20745276 RAX2 JASPAR yes 27247318
chr1 20745268 20745276 SHOX JASPAR yes 27247319
chr1 20745268 20745276 UNCX JASPAR yes 27247320
chr1 20745268 20745276 VAX1 JASPAR yes 27247321

Genes associated with rs549334526[chr1:20745268], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More