EnhancerDB
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  3. rs549348076[chr1:172838215]
Enhancers that have rs549348076[chr1:172838215]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172834705 172846575 enh85986
Colon (HCT116) Blood (T-cell) Lung (PC-9)
Transcript factors that have rs549348076[chr1:172838215]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172838041 172839241 TCF7L2 GTRD no Colon (HCT116) 21350347
chr1 172838080 172839259 TCF7L2 GTRD no Colon (HCT116) 21350348
chr1 172838120 172839201 TCF7L2 GTRD no Colon (HCT116) 21350349
chr1 172838163 172839137 TCF7L2 GTRD no Colon (HCT116) 21350350
chr1 172838208 172838220 MEF2A JASPAR yes 33159148
chr1 172838208 172838220 MEF2D JASPAR yes 33159149
chr1 172838209 172838219 MEF2A JASPAR yes 33159150
chr1 172838210 172838218 FOXL1 JASPAR yes 33159151
chr1 172838213 172838227 ONECUT1 JASPAR yes 33159152
chr1 172838213 172838227 ONECUT2 JASPAR yes 33159153
chr1 172838213 172838227 ONECUT3 JASPAR yes 33159154
chr1 172838214 172838218 TEAD2 TRANSFAC yes 33159155
Genes associated with rs549348076[chr1:172838215], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More