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- rs549397301[chr19:1281036]
Enhancers that have rs549397301[chr19:1281036]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
1280981 |
1281104 |
vista28158 |
|
|
Transcript factors that have rs549397301[chr19:1281036]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
1277808
|
1289200
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108353241
|
|
|
chr19
|
1277808
|
1289200
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108353242
|
|
|
chr19
|
1278220
|
1281487
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108353243
|
|
|
chr19
|
1278908
|
1284567
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108353244
|
|
|
chr19
|
1278908
|
1284567
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108353245
|
|
|
chr19
|
1279115
|
1281130
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108353246
|
|
|
chr19
|
1279169
|
1284518
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108353248
|
|
|
chr19
|
1279169
|
1284518
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108353249
|
|
|
chr19
|
1279192
|
1281363
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108353250
|
|
|
chr19
|
1279327
|
1284661
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108353251
|
|
|
chr19
|
1279327
|
1284661
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108353252
|
|
|
chr19
|
1279408
|
1284648
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108353253
|
|
|
chr19
|
1279408
|
1284648
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108353254
|
|
|
chr19
|
1279431
|
1281245
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108353255
|
|
|
chr19
|
1279466
|
1281391
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108353256
|
|
|
chr19
|
1279489
|
1281167
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108353257
|
|
|
chr19
|
1280647
|
1281703
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108353258
|
|
|
chr19
|
1280735
|
1281250
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108353259
|
|
|
chr19
|
1280895
|
1281213
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108353260
|
|
|
chr19
|
1280977
|
1281105
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108353261
|
|
|
chr19
|
1281028
|
1281038
|
SP1
|
JASPAR
|
yes
|
|
70780164
|
|
|
chr19
|
1281029
|
1281037
|
SP1
|
TRANSFAC
|
yes
|
|
70780165
|
|
|
chr19
|
1281031
|
1281036
|
SP1
|
TRANSFAC
|
yes
|
|
70780167
|
|
|
chr19
|
1281031
|
1281040
|
THAP1
|
JASPAR
|
yes
|
|
70780168
|
|
|
chr19
|
1281034
|
1281038
|
LFA1
|
TRANSFAC
|
yes
|
|
70780169
|
|
Genes associated with rs549397301[chr19:1281036], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |