EnhancerDB
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  3. rs549638850[chr2:236180373]
Enhancers that have rs549638850[chr2:236180373]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 236169845 236189775 enh19356
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Astrocyte Bone (Osteoblast) Lung (A549) Muscle (A673) Placenta Peripheral Blood (MM.1S) Lung (PC-9) Pancreas
Transcript factors that have rs549638850[chr2:236180373]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 236180363 236180374 PHOX2A JASPAR yes 81949972
chr2 236180363 236180374 PROP1 JASPAR yes 81949973
chr2 236180364 236180374 PAX3 JASPAR yes 81949974
chr2 236180364 236180374 PAX7 JASPAR yes 81949975
chr2 236180366 236180376 EMX1 JASPAR yes 81949976
chr2 236180366 236180376 HESX1 JASPAR yes 81949977
chr2 236180366 236180376 LHX6 JASPAR yes 81949978
chr2 236180366 236180376 MNX1 JASPAR yes 81949979
chr2 236180366 236180376 POU6F1 JASPAR yes 81949980
chr2 236180366 236180376 RAX JASPAR yes 81949981
chr2 236180367 236180375 LMX1A JASPAR yes 81949982
chr2 236180367 236180375 LMX1B JASPAR yes 81949983
chr2 236180367 236180375 NKX6-1 JASPAR yes 81949984
chr2 236180367 236180375 NKX6-2 JASPAR yes 81949985
chr2 236180367 236180375 VAX1 JASPAR yes 81949986
chr2 236180367 236180375 VAX2 JASPAR yes 81949987
chr2 236180367 236180375 VSX1 JASPAR yes 81949988
chr2 236180367 236180375 VSX2 JASPAR yes 81949989
Genes associated with rs549638850[chr2:236180373], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More