EnhancerDB
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  3. rs550022052[chr1:109057415]
Enhancers that have rs550022052[chr1:109057415]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 109052525 109058355 enh95890
Cervix (HeLa-S3) Epithelial (MCF-7)
Transcript factors that have rs550022052[chr1:109057415]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 109056658 109057628 ZNF143 GTRD no Epithelial (MCF-7) 21326509
chr1 109056713 109057604 ZNF143 GTRD no Epithelial (MCF-7) 21326510
chr1 109056737 109057616 ZNF143 GTRD no Epithelial (MCF-7) 21326511
chr1 109056744 109057561 ZNF143 GTRD no Epithelial (MCF-7) 21326512
chr1 109056780 109057500 ZNF143 GTRD no Epithelial (MCF-7) 21326513
chr1 109056791 109057422 ZNF143 GTRD no Epithelial (MCF-7) 21326514
chr1 109056798 109057416 ZNF143 GTRD no Epithelial (MCF-7) 21326515
chr1 109056805 109059792 ZNF143 GTRD no Epithelial (MCF-7) 21326516
chr1 109056860 109057415 ZNF143 GTRD no Epithelial (MCF-7) 21326517
chr1 109056915 109057436 ZNF143 GTRD no Epithelial (MCF-7) 21326521
chr1 109056915 109057460 ZNF143 GTRD no Epithelial (MCF-7) 21326522
chr1 109057006 109057426 ZNF143 GTRD no Epithelial (MCF-7) 21326525
chr1 109057405 109057415 GSC2 JASPAR yes 31392313
chr1 109057405 109057415 GSC JASPAR yes 31392314
chr1 109057413 109057417 YY1 TRANSFAC yes 31392316
Genes associated with rs550022052[chr1:109057415], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More