EnhancerDB
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  3. rs550036172[chr1:205202122]
Enhancers that have rs550036172[chr1:205202122]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205200111 205204365 enh86831
Blood (GM12878)
Transcript factors that have rs550036172[chr1:205202122]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205201742 205202229 ZNF143 GTRD no Epithelial (MCF-7) 107861063
chr1 205201985 205202581 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21371174
chr1 205201985 205202581 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861064
chr1 205202030 205202294 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21371175
chr1 205202030 205202294 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861065
chr1 205202063 205202653 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21371176
chr1 205202063 205202653 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861066
chr1 205202103 205202123 RREB1 JASPAR yes 34746127
chr1 205202105 205202125 RREB1 JASPAR yes 34746128
chr1 205202108 205202128 RREB1 JASPAR yes 34746129
chr1 205202113 205202133 RREB1 JASPAR yes 34746130
chr1 205202116 205202137 IRF1 JASPAR yes 34746131
chr1 205202119 205202133 IRF7 JASPAR yes 34746132
chr1 205202119 205202134 FOXP1 JASPAR yes 34746133
chr1 205202120 205202135 FOXP1 JASPAR yes 34746134
chr1 205202121 205202136 FOXP1 JASPAR yes 34746135
chr1 205202122 205202137 FOXP1 JASPAR yes 34746136
chr1 205202122 205202143 IRF1 JASPAR yes 34746137
Genes associated with rs550036172[chr1:205202122], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More