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- rs550225172[chr12:54427753]
Enhancers that have rs550225172[chr12:54427753]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
54426638 |
54427789 |
vista337 |
|
|
Transcript factors that have rs550225172[chr12:54427753]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
54416396
|
54430153
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
107686659
|
|
|
chr12
|
54416396
|
54430153
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108036936
|
|
|
chr12
|
54416396
|
54430153
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108036937
|
|
|
chr12
|
54427740
|
54427754
|
PLAG1
|
JASPAR
|
yes
|
|
56415243
|
|
|
chr12
|
54427745
|
54427755
|
SP1
|
JASPAR
|
yes
|
|
56415249
|
|
|
chr12
|
54427748
|
54427761
|
NFKB1
|
JASPAR
|
yes
|
|
56415250
|
|
|
chr12
|
54427748
|
54427761
|
NFKB2
|
JASPAR
|
yes
|
|
56415251
|
|
|
chr12
|
54427749
|
54427760
|
NFKB1
|
JASPAR
|
yes
|
|
56415252
|
|
|
chr12
|
54427750
|
54427761
|
NFKB1
|
JASPAR
|
yes
|
|
56415253
|
|
|
chr12
|
54427753
|
54427757
|
H4TF2
|
TRANSFAC
|
yes
|
|
56415254
|
|
Genes associated with rs550225172[chr12:54427753], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |