EnhancerDB
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  3. rs550261679[chr1:109248194]
Enhancers that have rs550261679[chr1:109248194]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 109240465 109250095 enh27057
Prostate (PC-3) Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Blood (T-cell)
Transcript factors that have rs550261679[chr1:109248194]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 109248176 109248197 IRF1 JASPAR yes 31400783
chr1 109248180 109248194 IRF7 JASPAR yes 31400786
chr1 109248180 109248195 IRF9 JASPAR yes 31400787
chr1 109248185 109248205 RREB1 JASPAR yes 31400788
chr1 109248186 109248206 RREB1 JASPAR yes 31400789
chr1 109248189 109248195 TCF4 TRANSFAC yes 31400790
chr1 109248189 109248201 FOXI1 JASPAR yes 31400791
chr1 109248189 109248204 FOXP1 JASPAR yes 31400792
chr1 109248190 109248210 RREB1 JASPAR yes 31400793
chr1 109248192 109248207 FOXA1 JASPAR yes 31400794
chr1 109248193 109248205 FOXI1 JASPAR yes 31400795
chr1 109248193 109248208 FOXP1 JASPAR yes 31400796
chr1 109248194 109248206 FOXC2 JASPAR yes 31400797
Genes associated with rs550261679[chr1:109248194], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More