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- rs550428530[chr17:80228625]
Enhancers that have rs550428530[chr17:80228625]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
80222961 |
80229562 |
enh52601 |
|
|
Transcript factors that have rs550428530[chr17:80228625]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
80227636
|
80229407
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21798498
|
|
|
chr17
|
80228285
|
80229301
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21798499
|
|
|
chr17
|
80228387
|
80229550
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21798500
|
|
|
chr17
|
80228617
|
80228628
|
STAT3
|
JASPAR
|
yes
|
|
56356191
|
|
|
chr17
|
80228619
|
80228634
|
FOXP1
|
JASPAR
|
yes
|
|
56356192
|
|
Genes associated with rs550428530[chr17:80228625], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |