EnhancerDB
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  3. rs550497560[chr1:21198787]
Enhancers that have rs550497560[chr1:21198787]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21194325 21204275 enh49676
Brain (SK-N-MC) Large Intestine Epithelial (MCF-7)
Transcript factors that have rs550497560[chr1:21198787]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21198779 21198792 EOMES JASPAR yes 27259826
chr1 21198781 21198791 TBR1 JASPAR yes 27259827
chr1 21198781 21198792 TBX20 JASPAR yes 27259828
chr1 21198781 21198792 TBX2 JASPAR yes 27259829
chr1 21198782 21198792 TBX21 JASPAR yes 27259830
chr1 21198783 21198791 MGA JASPAR yes 27259831
chr1 21198783 21198791 TBX15 JASPAR yes 27259832
chr1 21198783 21198791 TBX1 JASPAR yes 27259833
chr1 21198783 21198791 TBX4 JASPAR yes 27259834
chr1 21198783 21198791 TBX5 JASPAR yes 27259835
chr1 21198783 21198804 IRF1 JASPAR yes 27259836
chr1 21198785 21198800 PRDM1 JASPAR yes 27259837
chr1 21198785 21198800 STAT2 JASPAR yes 27259838
Genes associated with rs550497560[chr1:21198787], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More