EnhancerDB
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  3. rs550549119[chr1:115642285]
Enhancers that have rs550549119[chr1:115642285]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 115639685 115644200 enh573
Peripheral Blood (MM.1S) Bone (Osteoblast) Blood (Karpas-422)
Transcript factors that have rs550549119[chr1:115642285]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 115640110 115643717 ZNF143 GTRD no Epithelial (MCF-7) 107823349
chr1 115640466 115643194 ZNF143 GTRD no Epithelial (MCF-7) 107823354
chr1 115640486 115643298 ZNF143 GTRD no Epithelial (MCF-7) 107823355
chr1 115640711 115643757 ZNF143 GTRD no Epithelial (MCF-7) 107823358
chr1 115640763 115643734 ZNF143 GTRD no Epithelial (MCF-7) 107823360
chr1 115640810 115643146 ZNF274 GTRD no Bone Marrow (K562) 107823361
chr1 115640838 115644135 ZNF274 GTRD no Bone Marrow (K562) 107823364
chr1 115640852 115643049 ZNF274 GTRD no Bone Marrow (K562) 107823367
chr1 115640972 115643207 ZNF274 GTRD no Bone Marrow (K562) 107823371
chr1 115640983 115643063 ZNF274 GTRD no Bone Marrow (K562) 107823372
chr1 115640996 115643105 ZNF274 GTRD no Bone Marrow (K562) 107823377
chr1 115640998 115643007 ZNF274 GTRD no Bone Marrow (K562) 107823378
chr1 115641000 115643253 ZNF274 GTRD no Bone Marrow (K562) 107823379
chr1 115641008 115643650 ZNF274 GTRD no Cervix (HeLa-S3) 107823380
chr1 115641011 115643569 ZNF274 GTRD no Bone Marrow (K562) 107823381
chr1 115641026 115643138 ZNF274 GTRD no Bone Marrow (K562) 107823383
chr1 115641028 115642972 ZNF274 GTRD no Bone Marrow (K562) 107823384
chr1 115641032 115642861 ZNF274 GTRD no Bone Marrow (K562) 107823385
chr1 115641037 115643185 ZNF143 GTRD no Epithelial (MCF-7) 107823386
chr1 115641040 115642487 ZNF274 GTRD no Bone Marrow (K562) 107823387
chr1 115641040 115643211 ZNF274 GTRD no Bone Marrow (K562) 107823388
chr1 115641047 115643199 ZNF274 GTRD no Bone Marrow (K562) 107823389
chr1 115641065 115643107 ZNF274 GTRD no Bone Marrow (K562) 107823390
chr1 115641083 115643113 ZNF143 GTRD no Epithelial (MCF-7) 107823391
chr1 115641084 115643122 ZNF274 GTRD no Bone Marrow (K562) 107823392
chr1 115641096 115642690 ZNF274 GTRD no Liver (HepG2) 107823393
chr1 115641104 115643079 ZNF143 GTRD no Epithelial (MCF-7) 107823394
chr1 115641114 115643203 ZNF274 GTRD no Bone Marrow (K562) 107823395
chr1 115641200 115643070 ZNF274 GTRD no Liver (HepG2) 107823398
chr1 115641230 115643270 ZNF143 GTRD no Epithelial (MCF-7) 107823400
chr1 115641230 115643638 ZNF274 GTRD no Bone Marrow (K562) 107823401
chr1 115641330 115643154 ZNF143 GTRD no Epithelial (MCF-7) 107823404
chr1 115641334 115642994 TCF7L2 GTRD no Colon (HCT116) 107823405
chr1 115641334 115643200 ZNF274 GTRD no Liver (HepG2) 107823406
chr1 115641346 115643263 ZNF143 GTRD no Epithelial (MCF-7) 107823407
chr1 115641349 115642474 ZNF274 GTRD no Bone Marrow (K562) 107823408
chr1 115641349 115643181 ZNF274 GTRD no Bone Marrow (K562) 107823409
chr1 115641370 115643269 ZNF274 GTRD no Blood (GM12878) 107823411
chr1 115641373 115643190 TCF7L2 GTRD no Colon (HCT116) 107823412
chr1 115641374 115643263 ZNF143 GTRD no Epithelial (MCF-7) 107823413
chr1 115641378 115643140 ZBTB33 GTRD no Lung (A549) 107823414
chr1 115641379 115643095 ZNF143 GTRD no Epithelial (MCF-7) 107823415
chr1 115641381 115643063 ZNF274 GTRD no Cervix (HeLa-S3) 107823417
chr1 115641392 115643169 ZNF274 GTRD no Liver (HepG2) 107823418
chr1 115641395 115643061 ZNF143 GTRD no Epithelial (MCF-7) 107823419
chr1 115641402 115643169 ZNF274 GTRD no Cervix (HeLa-S3) 107823420
chr1 115641413 115642302 ZBTB33 GTRD no Lung (A549) 107823421
chr1 115641428 115643071 ZNF143 GTRD no Epithelial (MCF-7) 107823422
chr1 115641431 115642575 ZNF274 GTRD no Liver (HepG2) 107823423
chr1 115641437 115643363 ZNF274 GTRD no Blood (GM12878) 107823424
chr1 115641439 115643239 TCF7L2 GTRD no Colon (HCT116) 107823425
chr1 115641450 115642836 ZNF274 GTRD no Liver (HepG2) 107823426
chr1 115641457 115643160 ZNF274 GTRD no Bone Marrow (K562) 107823428
chr1 115641460 115643089 ZNF274 GTRD no Bone Marrow (K562) 107823429
chr1 115641463 115642994 ZNF274 GTRD no Liver (HepG2) 107823430
chr1 115641467 115643389 ZNF274 GTRD no Liver (HepG2) 107823431
chr1 115641472 115642655 ZNF274 GTRD no Liver (HepG2) 107823432
chr1 115641475 115643353 ZNF274 GTRD no Cervix (HeLa-S3) 107823433
chr1 115641476 115643182 ZNF143 GTRD no Epithelial (MCF-7) 107823434
chr1 115641477 115642895 ZNF274 GTRD no Bone Marrow (K562) 107823435
chr1 115641478 115642908 ZNF274 GTRD no Liver (HepG2) 107823436
chr1 115641482 115642993 TCF7L2 GTRD no Colon (HCT116) 107823438
chr1 115641507 115643002 TCF7L2 GTRD no Colon (HCT116) 107823439
chr1 115641531 115643157 TCF7L2 GTRD no Colon (HCT116) 107823441
chr1 115641533 115643239 ZBTB33 GTRD no Brain (SK-N-SH) 107823442
chr1 115641543 115642324 ZBTB33 GTRD no Lung (A549) 107823444
chr1 115641545 115642857 ZNF274 GTRD no Liver (HepG2) 107823445
chr1 115641549 115642985 TCF7L2 GTRD no Colon (HCT116) 107823446
chr1 115641567 115642805 ZNF274 GTRD no Liver (HepG2) 107823448
chr1 115641567 115643279 ZNF274 GTRD no Cervix (HeLa-S3) 107823449
chr1 115641572 115643134 ZBTB33 GTRD no Brain (SK-N-SH) 107823450
chr1 115641587 115642759 ZNF274 GTRD no Liver (HepG2) 107823451
chr1 115641588 115643200 ZNF274 GTRD no Blood (GM12878) 107823452
chr1 115641600 115643067 ZNF274 GTRD no Liver (HepG2) 107823455
chr1 115641602 115642758 TCF7L2 GTRD no Colon (HCT116) 107823456
chr1 115642284 115642299 PRDM1 JASPAR yes 31708145
Genes associated with rs550549119[chr1:115642285], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More