EnhancerDB
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  3. rs550573829[chr1:97667999]
Enhancers that have rs550573829[chr1:97667999]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 97659314 97670815 enh85969
Colon (HCT116) Peripheral Blood (MM.1S) Brain (SK-N-MC)
chr1 97667969 97668228 vista2624
VISTA
Transcript factors that have rs550573829[chr1:97667999]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 97667866 97668181 ZNF274 GTRD no Cervix (HeLa-S3) 107816279
chr1 97667915 97668287 ZNF274 GTRD no Liver (HepG2) 107816280
chr1 97667991 97668001 ALX3 JASPAR yes 31020003
chr1 97667991 97668001 GSX1 JASPAR yes 31020004
chr1 97667991 97668001 GSX2 JASPAR yes 31020005
chr1 97667991 97668001 LHX6 JASPAR yes 31020006
chr1 97667991 97668001 MIXL1 JASPAR yes 31020007
chr1 97667991 97668001 MNX1 JASPAR yes 31020008
chr1 97667991 97668001 NOTO JASPAR yes 31020009
chr1 97667991 97668001 POU6F1 JASPAR yes 31020010
chr1 97667991 97668001 RAX JASPAR yes 31020011
chr1 97667991 97668001 ALX3 JASPAR yes 118336587
chr1 97667991 97668001 GSX1 JASPAR yes 118336588
chr1 97667991 97668001 GSX2 JASPAR yes 118336589
chr1 97667991 97668001 LHX6 JASPAR yes 118336590
chr1 97667991 97668001 MIXL1 JASPAR yes 118336591
chr1 97667991 97668001 MNX1 JASPAR yes 118336592
chr1 97667991 97668001 NOTO JASPAR yes 118336593
chr1 97667991 97668001 POU6F1 JASPAR yes 118336594
chr1 97667991 97668001 RAX JASPAR yes 118336595
chr1 97667992 97668000 ISX JASPAR yes 31020012
chr1 97667992 97668000 LMX1A JASPAR yes 31020013
chr1 97667992 97668000 LMX1B JASPAR yes 31020014
chr1 97667992 97668000 NKX6-1 JASPAR yes 31020015
chr1 97667992 97668000 NKX6-2 JASPAR yes 31020016
chr1 97667992 97668000 PRRX1 JASPAR yes 31020017
chr1 97667992 97668000 RAX2 JASPAR yes 31020018
chr1 97667992 97668000 SHOX JASPAR yes 31020019
chr1 97667992 97668000 UNCX JASPAR yes 31020020
chr1 97667992 97668000 VAX1 JASPAR yes 31020021
chr1 97667992 97668000 ISX JASPAR yes 118336596
chr1 97667992 97668000 LMX1A JASPAR yes 118336597
chr1 97667992 97668000 LMX1B JASPAR yes 118336598
chr1 97667992 97668000 NKX6-1 JASPAR yes 118336599
chr1 97667992 97668000 NKX6-2 JASPAR yes 118336600
chr1 97667992 97668000 PRRX1 JASPAR yes 118336601
chr1 97667992 97668000 RAX2 JASPAR yes 118336602
chr1 97667992 97668000 SHOX JASPAR yes 118336603
chr1 97667992 97668000 UNCX JASPAR yes 118336604
chr1 97667992 97668000 VAX1 JASPAR yes 118336605
chr1 97667993 97668003 PAX3 JASPAR yes 31020022
chr1 97667993 97668003 PAX7 JASPAR yes 31020023
chr1 97667993 97668003 PAX3 JASPAR yes 118336606
chr1 97667993 97668003 PAX7 JASPAR yes 118336607
chr1 97667993 97668004 PROP1 JASPAR yes 31020024
chr1 97667993 97668004 PROP1 JASPAR yes 118336608
Genes associated with rs550573829[chr1:97667999], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More