EnhancerDB
  1. Home
  2. SNP
  3. rs550620542[chr6:139690851]
Enhancers that have rs550620542[chr6:139690851]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 139680305 139694175 enh9394
Liver (HepG2) Cervix (HeLa-S3) Astrocyte Blood (OCI-LY7) Muscle (A673) Placenta Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Blood (T-cell)
Transcript factors that have rs550620542[chr6:139690851]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 139690840 139690851 HOXA10 JASPAR yes 105786710
chr6 139690841 139690852 CDX2 JASPAR yes 105786712
chr6 139690847 139690853 TCF4 TRANSFAC yes 105786713
Genes associated with rs550620542[chr6:139690851], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More