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- rs550689404[chr19:4628539]
Enhancers that have rs550689404[chr19:4628539]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
4618825 |
4630195 |
enh17873 |
|
|
Transcript factors that have rs550689404[chr19:4628539]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
4627921
|
4628590
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21842033
|
|
|
chr19
|
4628524
|
4628543
|
PAX5
|
JASPAR
|
yes
|
|
112180101
|
|
|
chr19
|
4628533
|
4628554
|
IRF1
|
JASPAR
|
yes
|
|
112180102
|
|
|
chr19
|
4628534
|
4628555
|
IRF1
|
JASPAR
|
yes
|
|
112180103
|
|
|
chr19
|
4628536
|
4628557
|
IRF1
|
JASPAR
|
yes
|
|
112180104
|
|
|
chr19
|
4628537
|
4628558
|
IRF1
|
JASPAR
|
yes
|
|
112180105
|
|
|
chr19
|
4628538
|
4628553
|
FOXP1
|
JASPAR
|
yes
|
|
112180106
|
|
|
chr19
|
4628538
|
4628559
|
IRF1
|
JASPAR
|
yes
|
|
112180107
|
|
|
chr19
|
4628539
|
4628554
|
FOXP1
|
JASPAR
|
yes
|
|
112180108
|
|
|
chr19
|
4628539
|
4628560
|
IRF1
|
JASPAR
|
yes
|
|
112180109
|
|
Genes associated with rs550689404[chr19:4628539], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |