EnhancerDB
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  3. rs550765308[chr12:54189950]
Enhancers that have rs550765308[chr12:54189950]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54186005 54202829 enh80200
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs550765308[chr12:54189950]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54188051 54190510 ZNF143 GTRD no Epithelial (MCF-7) 21549657
chr12 54188081 54189966 ZNF143 GTRD no Epithelial (MCF-7) 21549658
chr12 54188250 54190215 ZNF274 GTRD no Cervix (HeLa-S3) 21549659
chr12 54188294 54190356 ZNF143 GTRD no Epithelial (MCF-7) 21549660
chr12 54188308 54190438 ZNF274 GTRD no Cervix (HeLa-S3) 21549663
chr12 54188338 54189974 ZNF143 GTRD no Epithelial (MCF-7) 21549666
chr12 54188465 54190205 ZNF274 GTRD no Cervix (HeLa-S3) 21549674
chr12 54189793 54190178 ZNF143 GTRD no Epithelial (MCF-7) 21549711
chr12 54189946 54189967 ZNF263 JASPAR yes 121008710
chr12 54189947 54189967 RREB1 JASPAR yes 121008711
chr12 54189947 54189968 ZNF263 JASPAR yes 121008712
chr12 54189949 54189970 ZNF263 JASPAR yes 121008713
chr12 54189950 54189971 ZNF263 JASPAR yes 121008714
Genes associated with rs550765308[chr12:54189950], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More