EnhancerDB
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  3. rs550785525[chr16:5551338]
Enhancers that have rs550785525[chr16:5551338]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 5550525 5557655 enh3866
Brain (SK-N-SH) Blood (Karpas-422)
Transcript factors that have rs550785525[chr16:5551338]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 5551317 5551338 IRF1 JASPAR yes 9302613
chr16 5551318 5551339 IRF1 JASPAR yes 9302615
chr16 5551319 5551340 IRF1 JASPAR yes 9302617
chr16 5551320 5551341 IRF1 JASPAR yes 9302619
chr16 5551321 5551342 IRF1 JASPAR yes 9302621
chr16 5551322 5551343 IRF1 JASPAR yes 9302623
chr16 5551323 5551338 FOXP1 JASPAR yes 9302624
chr16 5551323 5551344 IRF1 JASPAR yes 9302625
chr16 5551324 5551339 FOXP1 JASPAR yes 9302626
chr16 5551324 5551345 IRF1 JASPAR yes 9302627
chr16 5551325 5551340 FOXP1 JASPAR yes 9302628
chr16 5551325 5551346 IRF1 JASPAR yes 9302629
chr16 5551326 5551341 FOXP1 JASPAR yes 9302630
chr16 5551326 5551347 IRF1 JASPAR yes 9302631
chr16 5551327 5551342 FOXP1 JASPAR yes 9302632
chr16 5551327 5551348 IRF1 JASPAR yes 9302633
chr16 5551328 5551343 FOXP1 JASPAR yes 9302634
chr16 5551330 5551345 FOXP1 JASPAR yes 9302635
chr16 5551331 5551352 IRF1 JASPAR yes 9302636
chr16 5551332 5551347 FOXP1 JASPAR yes 9302637
chr16 5551333 5551354 IRF1 JASPAR yes 9302638
chr16 5551337 5551352 PRDM1 JASPAR yes 9302639
Genes associated with rs550785525[chr16:5551338], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More