EnhancerDB
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  3. rs552096224[chr6:17017231]
Enhancers that have rs552096224[chr6:17017231]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 17010705 17025095 enh38842
Prostate (PC-3) Brain (SK-N-MC) Esophagus Astrocyte Bone (Osteoblast) Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs552096224[chr6:17017231]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 17017223 17017236 SMAD2 JASPAR yes 100356918
chr6 17017228 17017236 MGA JASPAR yes 100356919
chr6 17017228 17017236 TBX15 JASPAR yes 100356920
chr6 17017228 17017236 TBX1 JASPAR yes 100356921
chr6 17017228 17017236 TBX4 JASPAR yes 100356922
chr6 17017228 17017236 TBX5 JASPAR yes 100356923
Genes associated with rs552096224[chr6:17017231], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More