EnhancerDB
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  3. rs552260791[chr4:89897270]
Enhancers that have rs552260791[chr4:89897270]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 89868485 89900595 enh21683
Skin (Keratinocyte) Prostate (PC-3) Large Intestine Prostate (RWPE1) Esophagus Lung (A549) Stomach Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs552260791[chr4:89897270]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 89897263 89897278 IRF9 JASPAR yes 91204221
chr4 89897264 89897274 RUNX3 JASPAR yes 91204222
chr4 89897264 89897282 IRF2 JASPAR yes 91204223
chr4 89897265 89897274 RUNX2 JASPAR yes 91204224
chr4 89897265 89897286 IRF1 JASPAR yes 91204225
chr4 89897267 89897282 STAT2 JASPAR yes 91204226
chr4 89897268 89897282 STAT1 JASPAR yes 91204227
chr4 89897269 89897281 IRF1 JASPAR yes 91204228
chr4 89897269 89897283 IRF7 JASPAR yes 91204229
chr4 89897269 89897283 IRF8 JASPAR yes 91204230
chr4 89897269 89897284 IRF9 JASPAR yes 91204231
Genes associated with rs552260791[chr4:89897270], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More