EnhancerDB
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  3. rs552524560[chr1:53763494]
Enhancers that have rs552524560[chr1:53763494]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 53755300 53765134 enh42963
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs552524560[chr1:53763494]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 53763485 53763504 RFX2 JASPAR yes 28921751
chr1 53763492 53763505 SCRT2 JASPAR yes 28921752
chr1 53763492 53763507 SCRT1 JASPAR yes 28921753
Genes associated with rs552524560[chr1:53763494], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More