-
Home
- SNP
- rs552619754[chr12:48816347]
Enhancers that have rs552619754[chr12:48816347]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
48811985 |
48816415 |
enh95448 |
|
|
Transcript factors that have rs552619754[chr12:48816347]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
48813311
|
48816785
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108029257
|
|
|
chr12
|
48813376
|
48816971
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108029258
|
|
|
chr12
|
48813428
|
48816720
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108029259
|
|
|
chr12
|
48813538
|
48816560
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108029268
|
|
|
chr12
|
48813598
|
48816774
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108029270
|
|
|
chr12
|
48813607
|
48818787
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108029272
|
|
|
chr12
|
48813692
|
48816934
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108029277
|
|
|
chr12
|
48813776
|
48817003
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108029290
|
|
|
chr12
|
48813824
|
48819707
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108029301
|
|
|
chr12
|
48813962
|
48816745
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108029319
|
|
|
chr12
|
48814256
|
48816370
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108029355
|
|
|
chr12
|
48814321
|
48816586
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108029361
|
|
|
chr12
|
48816329
|
48816347
|
RARA
|
JASPAR
|
yes
|
|
120743084
|
|
Genes associated with rs552619754[chr12:48816347], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |