EnhancerDB
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  3. rs552842877[chr1:236110181]
Enhancers that have rs552842877[chr1:236110181]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 236091945 236120510 enh12806
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Placenta Muscle (Myoblast) Breast Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs552842877[chr1:236110181]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 236108551 236110321 ZBTB33 GTRD no Lung (A549) 107886377
chr1 236108944 236110293 ZBTB33 GTRD no Lung (A549) 107886378
chr1 236108949 236110285 ZNF274 GTRD no Bone Marrow (K562) 107886381
chr1 236109071 236110190 ZNF143 GTRD no Epithelial (MCF-7) 107886385
chr1 236109080 236110403 ZNF143 GTRD no Epithelial (MCF-7) 107886386
chr1 236109109 236110442 ZNF274 GTRD no Cervix (HeLa-S3) 107886392
chr1 236109120 236110350 ZNF143 GTRD no Epithelial (MCF-7) 107886396
chr1 236109138 236110332 ZNF274 GTRD no Blood (GM12878) 21404051
chr1 236109138 236110332 ZNF274 GTRD no Blood (GM12878) 107886401
chr1 236109165 236110217 ZNF143 GTRD no Epithelial (MCF-7) 107886407
chr1 236109166 236110264 ZNF274 GTRD no Bone Marrow (K562) 107886408
chr1 236109174 236110464 ZNF274 GTRD no Blood (GM12878) 21404053
chr1 236109174 236110464 ZNF274 GTRD no Blood (GM12878) 107886410
chr1 236109198 236110252 ZNF274 GTRD no Blood (GM12878) 21404056
chr1 236109198 236110252 ZNF274 GTRD no Blood (GM12878) 107886418
chr1 236109222 236110467 ZNF274 GTRD no Bone Marrow (K562) 107886422
chr1 236109225 236110240 ZNF143 GTRD no Epithelial (MCF-7) 107886423
chr1 236109243 236110233 ZNF274 GTRD no Bone Marrow (K562) 107886424
chr1 236109263 236110292 ZNF274 GTRD no Blood (GM12878) 21404057
chr1 236109263 236110292 ZNF274 GTRD no Blood (GM12878) 107886427
chr1 236109318 236110944 ZNF143 GTRD no Epithelial (MCF-7) 107886443
chr1 236109356 236110295 ZNF274 GTRD no Blood (GM12878) 21404063
chr1 236109356 236110295 ZNF274 GTRD no Blood (GM12878) 107886459
chr1 236109592 236110215 ZNF274 GTRD no Bone Marrow (K562) 107886466
chr1 236109617 236110182 ZNF274 GTRD no Bone Marrow (K562) 107886467
chr1 236109635 236110231 TCF7L2 GTRD no Colon (HCT116) 107886468
chr1 236109690 236110471 ZNF143 GTRD no Epithelial (MCF-7) 107886470
chr1 236109799 236110273 ZNF274 GTRD no Blood (GM12878) 21404067
chr1 236109799 236110273 ZNF274 GTRD no Blood (GM12878) 107886471
chr1 236109815 236110221 CTCF UCSC Txn Factor no Conserved 107886472
chr1 236109818 236110188 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21404068
chr1 236109818 236110188 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107886473
chr1 236109861 236110221 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21404069
chr1 236109861 236110221 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107886475
chr1 236110024 236110620 ZNF274 GTRD no Bone Marrow (K562) 107886489
Genes associated with rs552842877[chr1:236110181], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More