-
Home
- SNP
- rs552892458[chr11:62413138]
Enhancers that have rs552892458[chr11:62413138]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr11 |
62413039 |
62413428 |
vista10514 |
|
|
Transcript factors that have rs552892458[chr11:62413138]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr11
|
62413028
|
62413729
|
P63
|
GTRD
|
no
|
Skin (Keratinocyte)
|
107975109
|
|
|
chr11
|
62413078
|
62413869
|
P63
|
GTRD
|
no
|
Skin (Keratinocyte)
|
107975110
|
|
|
chr11
|
62413088
|
62413404
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
107975111
|
|
|
chr11
|
62413088
|
62414410
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
107975112
|
|
|
chr11
|
62413096
|
62413334
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107975113
|
|
|
chr11
|
62413125
|
62413812
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107975114
|
|
|
chr11
|
62413129
|
62413144
|
SCRT1
|
JASPAR
|
yes
|
|
114081318
|
|
|
chr11
|
62413131
|
62413144
|
SCRT2
|
JASPAR
|
yes
|
|
114081319
|
|
|
chr11
|
62413133
|
62413139
|
PTF
|
TRANSFAC
|
yes
|
|
114081320
|
|
Genes associated with rs552892458[chr11:62413138], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |