-
Home
- SNP
- rs552939328[chr19:6489767]
Enhancers that have rs552939328[chr19:6489767]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
6487825 |
6491975 |
enh107750 |
|
|
Transcript factors that have rs552939328[chr19:6489767]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
6488975
|
6490255
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108377951
|
|
|
chr19
|
6489057
|
6490480
|
STAT3
|
GTRD
|
no
|
Blood (OCI-LY7)
|
108377952
|
|
|
chr19
|
6489058
|
6490494
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108377953
|
|
|
chr19
|
6489103
|
6490241
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108377954
|
|
|
chr19
|
6489116
|
6490491
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108377955
|
|
|
chr19
|
6489127
|
6490340
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108377956
|
|
|
chr19
|
6489130
|
6490305
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108377957
|
|
|
chr19
|
6489142
|
6490201
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108377958
|
|
|
chr19
|
6489143
|
6490278
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108377959
|
|
|
chr19
|
6489143
|
6490324
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108377960
|
|
|
chr19
|
6489150
|
6490274
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108377962
|
|
|
chr19
|
6489163
|
6490267
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108377963
|
|
|
chr19
|
6489163
|
6490345
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108377964
|
|
|
chr19
|
6489164
|
6489853
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108377965
|
|
|
chr19
|
6489175
|
6489962
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108377966
|
|
|
chr19
|
6489177
|
6490105
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108377967
|
|
|
chr19
|
6489180
|
6490095
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108377968
|
|
|
chr19
|
6489197
|
6490214
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108377970
|
|
|
chr19
|
6489210
|
6490293
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108377971
|
|
|
chr19
|
6489217
|
6490320
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108377973
|
|
|
chr19
|
6489225
|
6489951
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108377974
|
|
|
chr19
|
6489230
|
6490212
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108377975
|
|
|
chr19
|
6489293
|
6490059
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108377976
|
|
|
chr19
|
6489305
|
6490339
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108377977
|
|
|
chr19
|
6489312
|
6489983
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108377978
|
|
|
chr19
|
6489328
|
6489910
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108377979
|
|
|
chr19
|
6489410
|
6489910
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108377983
|
|
|
chr19
|
6489429
|
6490113
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108377984
|
|
|
chr19
|
6489444
|
6489824
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108377987
|
|
|
chr19
|
6489447
|
6489876
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108377988
|
|
|
chr19
|
6489466
|
6490096
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108377989
|
|
|
chr19
|
6489492
|
6490088
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108377990
|
|
|
chr19
|
6489493
|
6489863
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108377991
|
|
|
chr19
|
6489502
|
6489886
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108377992
|
|
|
chr19
|
6489505
|
6489885
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108377994
|
|
|
chr19
|
6489513
|
6489843
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108377995
|
|
|
chr19
|
6489516
|
6490176
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108377996
|
|
|
chr19
|
6489550
|
6489832
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108377999
|
|
|
chr19
|
6489564
|
6489891
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108378000
|
|
|
chr19
|
6489758
|
6489768
|
RORA
|
JASPAR
|
yes
|
|
112269747
|
|
|
chr19
|
6489759
|
6489770
|
ESRRB
|
JASPAR
|
yes
|
|
112269748
|
|
|
chr19
|
6489761
|
6489775
|
RXRB
|
JASPAR
|
yes
|
|
112269749
|
|
|
chr19
|
6489761
|
6489775
|
RXRG
|
JASPAR
|
yes
|
|
112269750
|
|
|
chr19
|
6489763
|
6489767
|
ESR1
|
TRANSFAC
|
yes
|
|
112269751
|
|
|
chr19
|
6489766
|
6489782
|
RFX4
|
JASPAR
|
yes
|
|
112269752
|
|
Genes associated with rs552939328[chr19:6489767], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |