EnhancerDB
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  3. rs552942078[chr12:66254525]
Enhancers that have rs552942078[chr12:66254525]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 66239258 66256635 enh75065
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Muscle (A673) Colon (HCT116)
Transcript factors that have rs552942078[chr12:66254525]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 66254515 66254525 HOXC10 JASPAR yes 121499229
chr12 66254516 66254526 PAX7 JASPAR yes 121499230
chr12 66254518 66254528 EMX1 JASPAR yes 121499232
chr12 66254518 66254528 EMX2 JASPAR yes 121499233
chr12 66254518 66254528 GBX2 JASPAR yes 121499234
chr12 66254518 66254528 GSX1 JASPAR yes 121499235
chr12 66254518 66254528 GSX2 JASPAR yes 121499236
chr12 66254518 66254528 HOXB2 JASPAR yes 121499237
chr12 66254518 66254528 HOXB3 JASPAR yes 121499238
chr12 66254518 66254528 LHX6 JASPAR yes 121499239
chr12 66254518 66254528 MEOX1 JASPAR yes 121499240
chr12 66254518 66254528 MEOX2 JASPAR yes 121499241
chr12 66254518 66254528 MNX1 JASPAR yes 121499242
chr12 66254518 66254528 POU6F1 JASPAR yes 121499243
chr12 66254518 66254528 RAX JASPAR yes 121499244
chr12 66254519 66254527 LMX1A JASPAR yes 121499245
chr12 66254519 66254527 LMX1B JASPAR yes 121499246
chr12 66254519 66254527 NKX6-1 JASPAR yes 121499247
chr12 66254519 66254527 NKX6-2 JASPAR yes 121499248
chr12 66254519 66254527 PDX1 JASPAR yes 121499249
chr12 66254519 66254527 VAX1 JASPAR yes 121499250
chr12 66254519 66254527 VAX2 JASPAR yes 121499251
chr12 66254519 66254527 VSX1 JASPAR yes 121499252
Genes associated with rs552942078[chr12:66254525], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More