EnhancerDB
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  3. rs552965669[chr10:98622966]
Enhancers that have rs552965669[chr10:98622966]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 98619843 98626735 enh28381
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Cervix (HeLa-S3) Stomach Colon (HCT116) Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Heart
Transcript factors that have rs552965669[chr10:98622966]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 98622945 98622966 IRF1 JASPAR yes 129365239
chr10 98622949 98622970 IRF1 JASPAR yes 129365247
chr10 98622951 98622972 IRF1 JASPAR yes 129365248
chr10 98622957 98622978 IRF1 JASPAR yes 129365249
chr10 98622958 98622973 FOXP1 JASPAR yes 129365250
chr10 98622958 98622979 IRF1 JASPAR yes 129365251
chr10 98622959 98622970 FOXP2 JASPAR yes 129365252
chr10 98622959 98622974 STAT2 JASPAR yes 129365253
chr10 98622960 98622975 FOXP1 JASPAR yes 129365254
chr10 98622962 98622977 FOXP1 JASPAR yes 129365255
chr10 98622963 98622978 FOXP1 JASPAR yes 129365256
chr10 98622964 98622979 FOXP1 JASPAR yes 129365257
chr10 98622965 98622980 FOXP1 JASPAR yes 129365258
chr10 98622966 98622981 FOXP1 JASPAR yes 129365259
Genes associated with rs552965669[chr10:98622966], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More