EnhancerDB
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  3. rs553028632[chr6:82478955]
Enhancers that have rs553028632[chr6:82478955]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 82467705 82489855 enh23384
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Stomach Muscle (A673) Placenta Lung (PC-9) Pancreas Epithelial (MCF-7)
Transcript factors that have rs553028632[chr6:82478955]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 82478943 82478958 LEF1 JASPAR yes 103110020
chr6 82478953 82478961 GATA3 JASPAR yes 103110021
chr6 82478953 82478961 GATA5 JASPAR yes 103110022
chr6 82478954 82478968 RORA JASPAR yes 103110023
Genes associated with rs553028632[chr6:82478955], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More