EnhancerDB
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  3. rs553045522[chr19:6579510]
Enhancers that have rs553045522[chr19:6579510]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6566085 6582575 enh4988
Bone Marrow (K562) Cervix (HeLa-S3) Esophagus Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Blood (T-cell)
Transcript factors that have rs553045522[chr19:6579510]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6575988 6581396 ZNF274 GTRD no Blood (GM12878) 108378571
chr19 6575988 6581396 ZNF274 GTRD no Blood (GM12878) 108378572
chr19 6576640 6581025 ZNF274 GTRD no Blood (GM12878) 108378578
chr19 6576640 6581025 ZNF274 GTRD no Blood (GM12878) 108378579
chr19 6579381 6581351 ZNF274 GTRD no Blood (GM12878) 108378735
chr19 6579384 6580209 ZNF274 GTRD no Blood (GM12878) 108378736
chr19 6579404 6581052 ZNF274 GTRD no Blood (GM12878) 108378737
chr19 6579407 6579919 ZNF274 GTRD no Blood (GM12878) 108378738
chr19 6579409 6581234 ZNF274 GTRD no Blood (GM12878) 108378739
chr19 6579424 6580584 ZNF274 GTRD no Blood (GM12878) 108378740
chr19 6579429 6580640 ZNF274 GTRD no Blood (GM12878) 108378741
chr19 6579442 6580529 ZNF274 GTRD no Blood (GM12878) 108378742
chr19 6579491 6580168 ZNF274 GTRD no Blood (GM12878) 108378743
chr19 6579497 6579510 SMAD2 JASPAR yes 112277988
chr19 6579501 6579512 FOSL2 JASPAR yes 112277989
chr19 6579508 6579516 SP1 TRANSFAC yes 112277990
chr19 6579508 6579518 SP1 JASPAR yes 112277991
chr19 6579509 6579515 SP1 TRANSFAC yes 112277992
chr19 6579509 6579519 SP1 JASPAR yes 112277993
Genes associated with rs553045522[chr19:6579510], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More