EnhancerDB
  1. Home
  2. SNP
  3. rs553156935[chr1:20085688]
Enhancers that have rs553156935[chr1:20085688]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 20081105 20095655 enh26567
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myotube)
Transcript factors that have rs553156935[chr1:20085688]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 20085667 20085688 IRF1 JASPAR yes 27215372
chr1 20085680 20085700 TP63 JASPAR yes 27215375
chr1 20085681 20085699 TP53 JASPAR yes 27215376
chr1 20085681 20085699 TP63 JASPAR yes 27215377
chr1 20085681 20085699 TP73 JASPAR yes 27215378
chr1 20085683 20085698 TP53 JASPAR yes 27215379
chr1 20085684 20085688 NFE TRANSFAC yes 27215380
chr1 20085684 20085697 ZBED1 JASPAR yes 27215381
Genes associated with rs553156935[chr1:20085688], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More