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- rs553200[chr2:27086148]
Enhancers that have rs553200[chr2:27086148]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr2 |
27082820 |
27086942 |
enh44743 |
|
|
Transcript factors that have rs553200[chr2:27086148]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr2
|
27086133
|
27086148
|
TFAP2A
|
JASPAR
|
yes
|
|
72557737
|
|
|
chr2
|
27086133
|
27086148
|
TFAP2C
|
JASPAR
|
yes
|
|
72557738
|
|
|
chr2
|
27086135
|
27086150
|
TFAP2A
|
JASPAR
|
yes
|
|
72557739
|
|
|
chr2
|
27086148
|
27086154
|
NFIC
|
JASPAR
|
yes
|
|
72557742
|
|
Genes associated with rs553200[chr2:27086148], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr2
|
26987152
|
27004099
|
+
|
SLC35F6
|
ENSG00000213699.4
|
26987152
|
82049
|
Ovary
|
0.348706
|
2196
|
|