EnhancerDB
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  3. rs553285178[chr10:89465252]
Enhancers that have rs553285178[chr10:89465252]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 89457742 89468755 enh28317
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Lung (PC-9) Astrocyte Stomach Colon (HCT116) Muscle (Myoblast) Pancreas Epithelial (MCF-7)
chr10 89465152 89465360 vista8192
VISTA
Transcript factors that have rs553285178[chr10:89465252]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 89465052 89465376 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107929575
chr10 89465056 89465552 GATA3 UCSC Txn Factor no Conserved 107929576
chr10 89465063 89465559 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21447881
chr10 89465063 89465559 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107929577
chr10 89465071 89465351 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107929578
chr10 89465073 89465543 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21447882
chr10 89465073 89465543 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107929579
chr10 89465082 89465372 MAFK UCSC Txn Factor no Conserved 107929580
chr10 89465082 89465372 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107929581
chr10 89465087 89465363 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107929582
chr10 89465087 89465367 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107929583
chr10 89465104 89465434 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21447883
chr10 89465104 89465434 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929584
chr10 89465109 89465349 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107929585
chr10 89465114 89465510 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21447884
chr10 89465114 89465510 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929586
chr10 89465121 89465451 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21447885
chr10 89465121 89465451 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929587
chr10 89465125 89465445 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21447886
chr10 89465125 89465445 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929588
chr10 89465132 89465492 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21447887
chr10 89465132 89465492 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929589
chr10 89465137 89465493 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107929590
chr10 89465140 89465396 CEBPB UCSC Txn Factor no Conserved 107929591
chr10 89465149 89465257 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21447888
chr10 89465149 89465257 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929592
chr10 89465162 89465502 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21447889
chr10 89465162 89465502 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929593
chr10 89465184 89465371 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21447890
chr10 89465184 89465371 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929594
chr10 89465248 89465263 STAT2 JASPAR yes 21127874
chr10 89465248 89465263 STAT2 JASPAR yes 128897250
chr10 89465249 89465382 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107929595
Genes associated with rs553285178[chr10:89465252], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More