EnhancerDB
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  3. rs553327885[chr6:17367169]
Enhancers that have rs553327885[chr6:17367169]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 17364305 17368455 enh84104
Prostate (PC-3)
Transcript factors that have rs553327885[chr6:17367169]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 17367158 17367173 MEF2A JASPAR yes 100373137
chr6 17367159 17367174 MEF2C JASPAR yes 100373138
chr6 17367160 17367172 MEF2A JASPAR yes 100373139
chr6 17367160 17367172 MEF2B JASPAR yes 100373140
chr6 17367160 17367172 MEF2D JASPAR yes 100373141
chr6 17367161 17367171 MEF2A JASPAR yes 100373142
chr6 17367165 17367176 HOXA10 JASPAR yes 100373144
chr6 17367165 17367180 HNF1A JASPAR yes 100373145
chr6 17367166 17367176 GSX2 JASPAR yes 100373146
chr6 17367166 17367176 HOXB2 JASPAR yes 100373147
chr6 17367166 17367176 HOXB3 JASPAR yes 100373148
chr6 17367166 17367176 MNX1 JASPAR yes 100373149
chr6 17367166 17367176 POU6F1 JASPAR yes 100373150
chr6 17367167 17367175 LMX1A JASPAR yes 100373151
chr6 17367167 17367175 LMX1B JASPAR yes 100373152
chr6 17367167 17367175 NKX6-1 JASPAR yes 100373153
chr6 17367167 17367175 NKX6-2 JASPAR yes 100373154
chr6 17367167 17367175 VAX1 JASPAR yes 100373155
chr6 17367167 17367175 VAX2 JASPAR yes 100373156
chr6 17367167 17367175 VSX1 JASPAR yes 100373157
chr6 17367167 17367175 VSX2 JASPAR yes 100373158
Genes associated with rs553327885[chr6:17367169], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More