EnhancerDB
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  3. rs553443604[chr16:27181930]
Enhancers that have rs553443604[chr16:27181930]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 27178861 27194637 enh31749
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Astrocyte Blood (OCI-LY7) Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Spleen Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs553443604[chr16:27181930]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 27181916 27181930 BATF3 JASPAR yes 10174290
chr16 27181922 27181933 USF1 JASPAR yes 10174291
chr16 27181922 27181933 USF2 JASPAR yes 10174292
chr16 27181922 27181934 PKNOX1 JASPAR yes 10174293
chr16 27181922 27181934 PKNOX2 JASPAR yes 10174294
chr16 27181922 27181934 TGIF2 JASPAR yes 10174295
chr16 27181923 27181930 USF2 TRANSFAC yes 10174296
chr16 27181923 27181933 SREBF1 JASPAR yes 10174297
chr16 27181923 27181933 SREBF2 JASPAR yes 10174298
chr16 27181923 27181933 TFEC JASPAR yes 10174299
chr16 27181925 27181930 USF2 TRANSFAC yes 10174300
Genes associated with rs553443604[chr16:27181930], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More