EnhancerDB
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  3. rs553479960[chr5:78445952]
Enhancers that have rs553479960[chr5:78445952]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 78445885 78450035 enh113992
Brain (SK-N-MC)
Transcript factors that have rs553479960[chr5:78445952]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 78445931 78445952 IRF1 JASPAR yes 63640859
chr5 78445932 78445953 IRF1 JASPAR yes 63640861
chr5 78445933 78445954 IRF1 JASPAR yes 63640863
chr5 78445934 78445955 IRF1 JASPAR yes 63640865
chr5 78445935 78445956 IRF1 JASPAR yes 63640867
chr5 78445936 78445957 IRF1 JASPAR yes 63640869
chr5 78445937 78445952 FOXP1 JASPAR yes 63640870
chr5 78445937 78445958 IRF1 JASPAR yes 63640871
chr5 78445938 78445953 FOXP1 JASPAR yes 63640872
chr5 78445938 78445959 IRF1 JASPAR yes 63640873
chr5 78445939 78445954 FOXP1 JASPAR yes 63640874
chr5 78445939 78445960 IRF1 JASPAR yes 63640875
chr5 78445940 78445955 FOXP1 JASPAR yes 63640876
chr5 78445942 78445957 FOXP1 JASPAR yes 63640877
chr5 78445943 78445964 IRF1 JASPAR yes 63640878
chr5 78445944 78445959 FOXP1 JASPAR yes 63640879
chr5 78445944 78445965 IRF1 JASPAR yes 63640880
chr5 78445948 78445969 IRF1 JASPAR yes 63640881
chr5 78445949 78445964 FOXP1 JASPAR yes 63640882
chr5 78445949 78445970 IRF1 JASPAR yes 63640883
chr5 78445950 78445971 IRF1 JASPAR yes 63640884
Genes associated with rs553479960[chr5:78445952], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More