EnhancerDB
  1. Home
  2. SNP
  3. rs553522409[chr1:175144362]
Enhancers that have rs553522409[chr1:175144362]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 175136005 175144520 enh79258
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Colon (HCT116) Lung (PC-9)
Transcript factors that have rs553522409[chr1:175144362]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 175144361 175144371 EMX1 JASPAR yes 33270565
chr1 175144361 175144371 GBX2 JASPAR yes 33270566
chr1 175144361 175144371 GSX1 JASPAR yes 33270567
chr1 175144361 175144371 GSX2 JASPAR yes 33270568
chr1 175144361 175144371 HOXB2 JASPAR yes 33270569
chr1 175144361 175144371 HOXB3 JASPAR yes 33270570
chr1 175144361 175144371 MEOX1 JASPAR yes 33270571
chr1 175144361 175144371 MEOX2 JASPAR yes 33270572
chr1 175144361 175144371 MIXL1 JASPAR yes 33270573
chr1 175144361 175144371 MNX1 JASPAR yes 33270574
chr1 175144361 175144372 HOXA10 JASPAR yes 33270575
chr1 175144362 175144370 LMX1A JASPAR yes 33270576
chr1 175144362 175144370 LMX1B JASPAR yes 33270577
chr1 175144362 175144370 NKX6-1 JASPAR yes 33270578
chr1 175144362 175144370 NKX6-2 JASPAR yes 33270579
chr1 175144362 175144370 PDX1 JASPAR yes 33270580
chr1 175144362 175144370 VAX1 JASPAR yes 33270581
chr1 175144362 175144370 VAX2 JASPAR yes 33270582
chr1 175144362 175144370 VSX1 JASPAR yes 33270583
chr1 175144362 175144372 HOXD13 JASPAR yes 33270584
Genes associated with rs553522409[chr1:175144362], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More