EnhancerDB
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  3. rs553565934[chr16:89567190]
Enhancers that have rs553565934[chr16:89567190]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89566691 89571239 enh16908
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Colon (HCT116) Lung (PC-9) Pancreas Epithelial (MCF-7)
Transcript factors that have rs553565934[chr16:89567190]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89559540 89567210 ZNF274 GTRD no Blood (GM12878) 108226646
chr16 89562866 89567755 ZBTB33 GTRD no Lung (A549) 108226652
chr16 89562973 89567205 ZNF143 GTRD no Epithelial (MCF-7) 21738681
chr16 89562973 89567205 ZNF143 GTRD no Epithelial (MCF-7) 108226656
chr16 89563571 89567198 ZNF143 GTRD no Epithelial (MCF-7) 21738686
chr16 89563571 89567198 ZNF143 GTRD no Epithelial (MCF-7) 108226689
chr16 89564384 89567314 ZNF143 GTRD no Epithelial (MCF-7) 21738695
chr16 89564384 89567314 ZNF143 GTRD no Epithelial (MCF-7) 108226733
chr16 89565179 89567191 TCF7L2 GTRD no Colon (HCT116) 21738700
chr16 89565179 89567191 TCF7L2 GTRD no Colon (HCT116) 108226823
chr16 89567179 89567193 PLAG1 JASPAR yes 12350467
chr16 89567186 89567191 SP1 TRANSFAC yes 12350468
chr16 89567187 89567192 SP1 TRANSFAC yes 12350469
chr16 89567190 89567195 SP1 TRANSFAC yes 12350470
Genes associated with rs553565934[chr16:89567190], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More