EnhancerDB
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  3. rs553611575[chr6:135229259]
Enhancers that have rs553611575[chr6:135229259]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 135227245 135235255 enh23636
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Placenta Muscle (Myoblast) Breast Pancreas (Panc1) Muscle (Myotube) Uterus Thymus
Transcript factors that have rs553611575[chr6:135229259]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 135229244 135229259 MEF2A JASPAR yes 105492023
chr6 135229250 135229265 MEF2C JASPAR yes 105492028
chr6 135229251 135229266 MEF2A JASPAR yes 105492029
chr6 135229252 135229263 FOXC1 JASPAR yes 105492033
chr6 135229252 135229264 MEF2A JASPAR yes 105492034
Genes associated with rs553611575[chr6:135229259], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More