EnhancerDB
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  3. rs553666539[chr1:153681248]
Enhancers that have rs553666539[chr1:153681248]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 153676065 153683955 enh12275
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Placenta Colon (HCT116) Epithelial (MCF-7)
Transcript factors that have rs553666539[chr1:153681248]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 153677354 153681717 ZNF274 GTRD no Cervix (HeLa-S3) 21340069
chr1 153680951 153681455 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21340133
chr1 153680976 153681452 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21340134
chr1 153681025 153681395 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21340135
chr1 153681088 153681428 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21340136
chr1 153681090 153681420 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21340137
chr1 153681094 153681414 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21340138
chr1 153681101 153681431 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21340139
chr1 153681114 153681418 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21340140
chr1 153681118 153681374 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21340141
chr1 153681189 153681318 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21340142
chr1 153681213 153681432 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21340143
chr1 153681241 153681251 TEAD1 JASPAR yes 32265812
chr1 153681241 153681251 TEAD4 JASPAR yes 32265813
chr1 153681241 153681253 TEAD1 JASPAR yes 32265814
chr1 153681242 153681250 TEAD3 JASPAR yes 32265815
chr1 153681248 153681263 RFX5 JASPAR yes 32265816
Genes associated with rs553666539[chr1:153681248], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More