EnhancerDB
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  3. rs553901480[chr1:2729592]
Enhancers that have rs553901480[chr1:2729592]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2725725 2729875 enh92020
Liver (HepG2)
Transcript factors that have rs553901480[chr1:2729592]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2729576 2729594 TP63 JASPAR yes 26246168
chr1 2729584 2729598 CREB3 JASPAR yes 26246169
chr1 2729585 2729595 MAX JASPAR yes 26246170
chr1 2729585 2729596 USF1 JASPAR yes 26246171
chr1 2729585 2729596 USF2 JASPAR yes 26246172
chr1 2729585 2729597 HES7 JASPAR yes 26246173
chr1 2729585 2729599 TLX1 JASPAR yes 26246174
chr1 2729586 2729596 BHLHE40 JASPAR yes 26246175
chr1 2729586 2729596 BHLHE41 JASPAR yes 26246176
chr1 2729586 2729596 HEY1 JASPAR yes 26246177
chr1 2729586 2729596 HEY2 JASPAR yes 26246178
chr1 2729586 2729596 MAX JASPAR yes 26246179
chr1 2729586 2729596 MLXIPL JASPAR yes 26246180
chr1 2729586 2729596 MLX JASPAR yes 26246181
chr1 2729586 2729596 MNT JASPAR yes 26246182
chr1 2729586 2729596 SREBF2 JASPAR yes 26246183
chr1 2729586 2729596 TFE3 JASPAR yes 26246184
chr1 2729586 2729596 TFEB JASPAR yes 26246185
chr1 2729586 2729596 TFEC JASPAR yes 26246186
chr1 2729586 2729597 USF1 JASPAR yes 26246187
chr1 2729586 2729597 USF2 JASPAR yes 26246188
chr1 2729587 2729597 MAX JASPAR yes 26246189
chr1 2729588 2729593 MYC TRANSFAC yes 26246190
chr1 2729588 2729593 USF1 TRANSFAC yes 26246191
chr1 2729588 2729593 USF2 TRANSFAC yes 26246192
chr1 2729588 2729595 USF1 JASPAR yes 26246193
Genes associated with rs553901480[chr1:2729592], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More