-
Home
- SNP
- rs554050196[chr18:56192904]
Enhancers that have rs554050196[chr18:56192904]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr18 |
56190905 |
56196315 |
enh17745 |
|
|
| chr18 |
56192839 |
56193142 |
vista27604 |
|
|
Transcript factors that have rs554050196[chr18:56192904]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr18
|
56192851
|
56193161
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108338364
|
|
|
chr18
|
56192879
|
56193249
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108338365
|
|
|
chr18
|
56192879
|
56193249
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108338366
|
|
|
chr18
|
56192900
|
56192913
|
SMAD2
|
JASPAR
|
yes
|
|
42715275
|
|
|
chr18
|
56192900
|
56192913
|
SMAD2
|
JASPAR
|
yes
|
|
110955918
|
|
|
chr18
|
56192903
|
56192911
|
MEIS3
|
JASPAR
|
yes
|
|
42715276
|
|
|
chr18
|
56192903
|
56192911
|
MEIS3
|
JASPAR
|
yes
|
|
110955919
|
|
|
chr18
|
56192904
|
56192908
|
NFE
|
TRANSFAC
|
yes
|
|
42715277
|
|
|
chr18
|
56192904
|
56192908
|
NFE
|
TRANSFAC
|
yes
|
|
110955920
|
|
|
chr18
|
56192904
|
56193168
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108338367
|
|
Genes associated with rs554050196[chr18:56192904], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |