EnhancerDB
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  3. rs554064685[chr16:85753844]
Enhancers that have rs554064685[chr16:85753844]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85746708 85760055 enh16876
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Muscle (A673) Placenta Breast Lung (PC-9) Pancreas Spleen Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs554064685[chr16:85753844]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85749192 85754767 ZNF143 GTRD no Epithelial (MCF-7) 21730872
chr16 85749192 85754767 ZNF143 GTRD no Epithelial (MCF-7) 108216962
chr16 85749292 85755128 ZNF143 GTRD no Epithelial (MCF-7) 21730873
chr16 85749292 85755128 ZNF143 GTRD no Epithelial (MCF-7) 108216963
chr16 85749976 85754256 ZNF143 GTRD no Epithelial (MCF-7) 21730885
chr16 85749976 85754256 ZNF143 GTRD no Epithelial (MCF-7) 108216984
chr16 85750754 85754044 ZNF143 GTRD no Epithelial (MCF-7) 21730888
chr16 85750754 85754044 ZNF143 GTRD no Epithelial (MCF-7) 108217002
chr16 85751001 85754215 P63 GTRD no Skin (Keratinocyte) 108217016
chr16 85751084 85754304 ZNF143 GTRD no Epithelial (MCF-7) 21730894
chr16 85751084 85754304 ZNF143 GTRD no Epithelial (MCF-7) 108217023
chr16 85751282 85754195 AR GTRD no Prostate (PC-3) 21730896
chr16 85751282 85754195 AR GTRD no Prostate (PC-3) 108217028
chr16 85751459 85754133 ZNF143 GTRD no Epithelial (MCF-7) 21730897
chr16 85751459 85754133 ZNF143 GTRD no Epithelial (MCF-7) 108217034
chr16 85751561 85754086 ZNF143 GTRD no Epithelial (MCF-7) 21730901
chr16 85751561 85754086 ZNF143 GTRD no Epithelial (MCF-7) 108217059
chr16 85753826 85753847 ZNF263 JASPAR yes 12091896
chr16 85753837 85753850 SMAD2 JASPAR yes 12091897
Genes associated with rs554064685[chr16:85753844], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More