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- rs554100052[chr19:4936832]
Enhancers that have rs554100052[chr19:4936832]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
4936813 |
4936840 |
vista28371 |
|
|
Transcript factors that have rs554100052[chr19:4936832]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
4935933
|
4936892
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108373929
|
|
|
chr19
|
4936815
|
4936836
|
IRF1
|
JASPAR
|
yes
|
|
70791332
|
|
|
chr19
|
4936819
|
4936834
|
PRDM1
|
JASPAR
|
yes
|
|
70791334
|
|
|
chr19
|
4936819
|
4936834
|
STAT2
|
JASPAR
|
yes
|
|
70791335
|
|
|
chr19
|
4936824
|
4936838
|
IRF7
|
JASPAR
|
yes
|
|
70791336
|
|
|
chr19
|
4936825
|
4936840
|
PRDM1
|
JASPAR
|
yes
|
|
70791337
|
|
|
chr19
|
4936826
|
4936838
|
IRF1
|
JASPAR
|
yes
|
|
70791338
|
|
Genes associated with rs554100052[chr19:4936832], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |