EnhancerDB
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  3. rs554115716[chr19:4339040]
Enhancers that have rs554115716[chr19:4339040]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4336645 4341069 enh89918
Prostate (RWPE1)
Transcript factors that have rs554115716[chr19:4339040]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4339025 4339040 FOXP1 JASPAR yes 112168302
chr19 4339025 4339040 HNF1A JASPAR yes 112168303
chr19 4339026 4339040 ONECUT2 JASPAR yes 112168305
chr19 4339026 4339040 ONECUT3 JASPAR yes 112168306
chr19 4339027 4339043 POU4F2 JASPAR yes 112168310
chr19 4339027 4339043 POU4F3 JASPAR yes 112168311
chr19 4339028 4339043 FOXA1 JASPAR yes 112168313
chr19 4339029 4339041 FOXI1 JASPAR yes 112168314
chr19 4339029 4339043 POU4F1 JASPAR yes 112168315
chr19 4339029 4339044 FOXP1 JASPAR yes 112168316
chr19 4339029 4339044 HNF1A JASPAR yes 112168317
chr19 4339030 4339042 FOXC2 JASPAR yes 112168318
chr19 4339030 4339044 FOXF2 JASPAR yes 112168319
chr19 4339030 4339044 ONECUT3 JASPAR yes 112168320
chr19 4339031 4339042 FOXB1 JASPAR yes 112168321
chr19 4339031 4339042 FOXC1 JASPAR yes 112168322
chr19 4339031 4339042 PROP1 JASPAR yes 112168323
chr19 4339033 4339048 FOXP1 JASPAR yes 112168325
chr19 4339034 4339046 FOXC2 JASPAR yes 112168326
chr19 4339035 4339046 FOXC1 JASPAR yes 112168327
chr19 4339036 4339040 YY1 TRANSFAC yes 112168328
chr19 4339038 4339052 ONECUT2 JASPAR yes 112168329
chr19 4339038 4339052 ONECUT3 JASPAR yes 112168330
Genes associated with rs554115716[chr19:4339040], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More