EnhancerDB
  1. Home
  2. SNP
  3. rs554173863[chr16:12642502]
Enhancers that have rs554173863[chr16:12642502]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 12630505 12654813 enh3901
Liver (HepG2) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Blood (Karpas-422) Muscle (Myoblast) Muscle (Myotube) Thymus
chr16 12642265 12642503 vista21928
VISTA
Transcript factors that have rs554173863[chr16:12642502]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 12642306 12642902 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21691414
chr16 12642306 12642902 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108183111
chr16 12642381 12642901 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21691415
chr16 12642381 12642901 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108183112
chr16 12642403 12642643 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21691416
chr16 12642403 12642643 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108183113
chr16 12642484 12642503 REST JASPAR yes 9589955
chr16 12642484 12642503 REST JASPAR yes 49344829
chr16 12642496 12642508 SRF JASPAR yes 9589957
chr16 12642496 12642508 SRF JASPAR yes 49344831
chr16 12642501 12642505 YY1 TRANSFAC yes 9589958
chr16 12642501 12642505 YY1 TRANSFAC yes 49344832
Genes associated with rs554173863[chr16:12642502], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More